SpatialQPFs/DESCRIPTION at main · Genentech/SpatialQPFs · GitHub

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Package: SpatialQPFs
Type: Package
Title: An R package for deciphering cell-cell spatial relationship
Version: 2.0.0
Author: Xiao Li
Maintainer: Xiao Li <xiao.li.xl2@roche.com>
Description: This library generates spatial features of a given WSI or FOV, from spatial statistics and graph theoretic methods, including analysis of point pattern data, areal data, geostatistical data and graph data. The package also calculates various versions of entropy, including different spatial entropy.
License: Genentech_Non-Commercial_Software_License_1.0
Encoding: UTF-8
RoxygenNote: 7.3.1
Depends: R (>= 4.1.0)
Imports:
    magrittr,
    dplyr,
    tidyr,
    igraph,
    SpatEntropy,
    spatstat.geom,
    spatstat.explore,
    spatstat.utils,
    ggplot2,
    mclust,
    spdep,
    sp,
    gstat,
    rpart,
    FNN,
    boot,
    dbmss,
    ecespa,
    plotly,
    pracma,
    reshape2,
    sf,
    sm,
    splancs,
    stringr,
    RTriangle,
    plyr,
    RANN,
    ineq,
    moments
Suggests:
    knitr,
    rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2023-05-24 21:55:23 UTC; Xiao Li