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    13 repositories

    • donedrive

      Public
      ☁️ The OneDrive download assistant
      downloadonedrivesharepoint
      downloadonedrivesharepointquickxorhash
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 17, 2026Jul 17, 2026

    • downstream-analysis-toolbox

      Public
      Semi-automated approaches for interrogating spatial heterogeneity of tissue samples
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jun 1, 2026Jun 1, 2026

    • blaupause

      Public
      🗂️ The copy assistant
      backupcopytransfer
      backupcopytransferrsyncarchiverobocopy
      Rust
      •
      GNU General Public License v3.0
      •1•4•0•0•Updated Dec 21, 2025Dec 21, 2025

    • Spatial_Permutation_and_Normalization

      Public archive
      Permutation analysis and normalization strategy for the colocatome paper.
      R
      •
      MIT License
      •1•0•0•0•Updated Dec 15, 2025Dec 15, 2025

    • tools

      Public
      useful tools for lab work
      flowfcscytometry
      flowfcscytometry
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Dec 4, 2025Dec 4, 2025

    • tifffile

      Public
      Read and write TIFF files. Forked from https://pypi.org/project/tifffile
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •163•0•0•0•Updated Jun 18, 2025Jun 18, 2025

    • cellpose

      Public
      a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •642•0•0•0•Updated Jun 7, 2025Jun 7, 2025

    • spotiflow

      Public
      Accurate and efficient spot detection for microscopy data
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •21•0•0•0•Updated Jun 6, 2025Jun 6, 2025

    • FlowIO

      Public
      A Python library for reading and writing Flow Cytometry Standard (FCS) files
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •22•0•0•0•Updated Feb 2, 2025Feb 2, 2025

    • FlowRepositoryR

      Public archive
      FlowRepositoryR - R library to access FlowRepository.org
      R
      •1•0•0•0•Updated Jan 6, 2025Jan 6, 2025

    • FlowKit

      Public
      A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •56•0•0•0•Updated Nov 28, 2024Nov 28, 2024

    • Italo

      Public archive
      Image transfer tool for Indica Labs' HALO
      searchapigraphql
      searchapigraphqlsqlcopytransferhalolabsindica
      Python
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Nov 15, 2024Nov 15, 2024

    • FlowUtils

      Public
      FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation task…
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •10•0•0•0•Updated Mar 28, 2024Mar 28, 2024
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