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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Request for adding TopAnat tool to IUC: please review
#8218 opened Jul 24, 2026 by fbastian • Draft
5 of 8 tasks
2
samestr DB builder: place the MetaPhlAn pkl inside the DB directory (+galaxy3)
#8217 opened Jul 24, 2026 by mvdbeek Member Loading…
3
Extended spaCy Integration ready-for-review
#8216 opened Jul 23, 2026 by greenwoodma Loading…
16
RepeatMasker: update to 4.2.4 and add cached Dfam (FamDB) library support
#8215 opened Jul 22, 2026 by mvdbeek Member Loading…
Add data_manager_repeatmasker
#8214 opened Jul 22, 2026 by mvdbeek Member Loading…
Add tool update and review guidance
#8213 opened Jul 22, 2026 by mvdbeek Member Loading…
Filt3r wrapper for FLT3-ITD detection
#8211 opened Jul 22, 2026 by joachimwolff Contributor Loading…
5 of 8 tasks
6
picard AddOrReplaceReadGroups: pass CN (sequencing center) through to Picard skip-version-check Allow IUC members to skip the version linter in PR reviews (use only for partially updated suites).
#8210 opened Jul 22, 2026 by mvdbeek Member Loading…
Updating tools/metaphlan from version 4.2.4 to 4.2.5
#8199 opened Jul 20, 2026 by gxydevbot Collaborator Loading…
Add pggb ready-for-review
#8196 opened Jul 17, 2026 by d-callan Contributor Loading…
5 of 8 tasks
16
Update tools/irma to 1.3.5 ready-for-review skip-url-check Allow IUC members to skip the URL linter in PR reviews.
#8194 opened Jul 17, 2026 by SaimMomin12 Contributor Loading…
4 of 8 tasks
1
Add Trackastra track as Galaxy tool ready-for-review
#8190 opened Jul 16, 2026 by khaled196 Contributor Loading…
5 of 8 tasks
1
Updating tools/ncbi_datasets from version 18.32.0 to 18.33.1
#8179 opened Jul 13, 2026 by gxydevbot Collaborator Loading…
Updating tools/irma from version 1.2.0 to 1.3.5
#8177 opened Jul 13, 2026 by gxydevbot Collaborator Loading…
Update Beacon2-RI-tools to V2
#8167 opened Jul 7, 2026 by khaled196 Contributor • Draft
5 tasks
1
New tool addition: minibwa
#8159 opened Jul 6, 2026 by SaimMomin12 Contributor • Draft
3 of 5 tasks
1
12
Updating tools/liana from version 1.7.3 to 1.8.1
#8156 opened Jul 6, 2026 by gxydevbot Collaborator Loading…
5
[WIP] adds a statistics script and a few plot
#8152 opened Jul 2, 2026 by bgruening Member • Draft
4 tasks
5
maaslin3: Add Formular vs Individual Factors in model specification ready-for-review
#8149 opened Jun 30, 2026 by MaraBesemer Contributor Loading…
5 tasks
3
Remove the download option to obitaxonomy
#8147 opened Jun 30, 2026 by kpayet26 Contributor Loading…
3 of 5 tasks
4
Wrap warcio indexing tool
#8143 opened Jun 26, 2026 by eamonnbell-dur • Draft
5 tasks
Add Enzwizzerd tools to Galaxy
#8139 opened Jun 25, 2026 by khaled196 Contributor Loading…
3 of 5 tasks
23
vg: fix help RST and apply IUC tool_xml formatting conventions
#8095 opened Jun 13, 2026 by richard-burhans Member Loading…
2
Fix large parts of testcase validation errors skip-url-check Allow IUC members to skip the URL linter in PR reviews. skip-version-check Allow IUC members to skip the version linter in PR reviews (use only for partially updated suites).
#8094 opened Jun 12, 2026 by mvdbeek Member • Draft
5 tasks
6
featureCounts: apply IUC tool_xml formatting conventions
#8090 opened Jun 11, 2026 by richard-burhans Member Loading…
20
ProTip! What’s not been updated in a month: updated:<2026-06-25.